Show notes
In this episode,
David Dylus talks aboutRead2Tree,a tool that builds alignment matrices and phylogenetic trees from rawsequencing reads.By leveraging the database of orthologous genes called OMA, Read2Tree bypasses traditional, time-consuming steps such as genome assembly, annotation and all-versus-all sequence comparisons.Links:
- Inference of phylogenetic trees directly from raw sequencing reads using Read2Tree(David Dylus, Adrian Altenhoff, Sina Majidian, Fritz J. Sedlazeck, Christophe Dessimoz)
- Background story
- Read2Tree on GitHub
- OMA browser
- The Guardian’s podcast about Victoria Amelina and Volodymyr Vakulenko
If you enjoyed this episode, please consider supporting the podcast on Patreon.

