<p>In this episode, <a href="https://www.linkedin.com/in/hojoonlee/">HoJoon Lee</a> and <a href="https://www.researchgate.net/profile/Seung_Woo_Cho">Seung Woo Cho</a> explain how to perform a CRISPR
experiment and how to analyze its results. HoJoon and Seung Woo developed an
algorithm that analyzes sequenced amplicons containing the CRISPR-induced
double-strand break site and figures out what exactly happened there (e.g.
a deletion, insertion, substitution etc.)</p>


      

      
      <p>Links:</p>

<ul>
  <li><a href="https://dx.doi.org/10.1101/416768">CRISPRpic: Fast and precise analysis for CRISPR-induced mutations via prefixed index counting</a></li>
  <li><a href="https://github.com/compbio/CRISPRpic">CRISPRpic on GitHub</a></li>
</ul>

#28 Space-efficient variable-order Markov models with Fabio Cunial

A podcast about computational biology, bioinformatics, and next generation sequencing.