In this episode, <a href="http://www.iac.rm.cnr.it/~filippo/index.html">Filippo Castiglione</a> and I discuss different ways to model the immune system.

 

 
 Links:

<ul>
 <li><a href="https://www.ncbi.nlm.nih.gov/pubmed/1575893">Celada’s and Seiden’s 1992 paper, “A computer model of cellular interactions in the immune system”</a></li>
 <li><a href="https://www.ncbi.nlm.nih.gov/pubmed/11535199">Filippo’s 2001 paper, “Design and implementation of an immune system simulator”</a></li>
 <li><a href="http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0009862">PLOS One paper, “Computational Immunology Meets Bioinformatics: The Use of Prediction Tools for Molecular Binding in the Simulation of the Immune System”</a></li>
 <li><a href="https://www.ncbi.nlm.nih.gov/pubmed/28549079">A paper about modelling sea bass vaccination using C-ImmSim</a></li>
 <li><a href="http://www.iac.rm.cnr.it/~filippo/c-immsim/index.html">C-ImmSim homepage</a></li>
 <li><a href="http://kraken.iac.rm.cnr.it/C-IMMSIM/">The online simulator based on C-ImmSim</a> and <a href="https://academic.oup.com/bioinformatics/article-lookup/doi/10.1093/bioinformatics/btr335">the paper describing it</a></li>
</ul>

Special thanks to Martina Stoycheva for bringing this work to my attention.

#13 Bracken with Jennifer Lu

A podcast about computational biology, bioinformatics, and next generation sequencing.