<p>In this episode, <a href="https://www.cs.cmu.edu/~mingfus/">Mingfu Shao</a> talks about
<a href="https://github.com/Kingsford-Group/scallop">Scallop</a>, an accurate reference-based transcript assembler.</p>

      

      
      <p>Links:</p>

<ul>
  <li><a href="http://www.biorxiv.org/content/early/2017/04/03/123612">The preprint about Scallop</a></li>
  <li><a href="http://biorxiv.org/content/early/2016/11/16/087759">The preprint about flow decomposition</a></li>
  <li><a href="http://www.birs.ca/events/2017/5-day-workshops/17w5131/videos/watch/201703301037-Langmead.html">The video of a talk by Ben Langmead about Rail-RNA</a></li>
  <li><a href="http://biorxiv.org/content/early/2015/08/11/019067">The preprint about Rail-RNA</a></li>
</ul>

#2 Single-cell RNA sequencing with Aleksandra Kolodziejczyk

A podcast about computational biology, bioinformatics, and next generation sequencing.